BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038H04LP1|AL430614
(939 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1040 1808 0.0
>3x_Contig1040
Length = 3420
Score = 1808 bits (910), Expect = 0.0
Identities = 925/930 (99%), Gaps = 1/930 (0%)
Strand = Plus / Minus
Query: 11 gatcttatattgtgttgtcttaaagatgaaagaataggacaagaacgaaattgtagctgc 70
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2522 gatcttatattgtgttgtcttaaagatgaaagaataggacaagaacgaaattgtagctgc 2463
Query: 71 cagtataattacagagtaccatgatattaattgctcctggtgtagatgcgtatgatgtga 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2462 cagtataattacagagtaccatgatattaattgctcctggtgtagatgcgtatgatgtga 2403
Query: 131 gttgggtatcgtctggttaatttcttcgtgatgatcagcagtagaactttctgcgaatag 190
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2402 gtggggtatcgtctggttaatttcttcgtgatgatcagcagtagaactttctgcgaatag 2343
Query: 191 aacggctatttcttctagcacatgaaatatcaaatctaaaccagcaaaacaaatcgagat 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2342 aacggctatttcttctagcacatgaaatatcaaatctaaaccagcaaaacaaatcgagat 2283
Query: 251 tgcaaaagcaaatgacaacaatacatcaattctgttcaagccgaacggcagagttatcgt 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2282 tgcaaaagcaaatgacaacaatacatcaattctgttcaagccgaacggcagagttatcgt 2223
Query: 311 tcctgttttccagatttcgaacttagctaaaagctctgttaaaatggcaaagataccacc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2222 tcctgttttccagatttcgaacttagctaaaagctctgttaaaatggcaaagataccacc 2163
Query: 371 aagaacatcatacgtgaggmaatgacacaacgttccgagtaagttccatcccttctgatg 430
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2162 aagaacatcatacgtgaggaaatgacacaacgttccgagtaagttccatcccttctgatg 2103
Query: 431 ccctaggttgaaaatgaatatcgatatcagaagttcaacgatgcagattgaaatttggat 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2102 ccctaggttgaaaatgaatatcgatatcagaagttcaacgatgcagattgaaatttggat 2043
Query: 491 atgtgtcaatggccacgtcaagttatttctgagatctttgaaatccggtactggtaatga 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2042 atgtgtcaatggccacgtcaagttatttctgagatctttgaaatccggtactggtaatga 1983
Query: 551 ctttataatatttaacggttccttaacctcaggttcttggaagaagttcatggaaacaga 610
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1982 ctttataatatttaacggttccttaacctcaggttcttggaagaagttcatggaaacaga 1923
Query: 611 agagtgtttatatctgtggcccttacgaaacatggcgcttcgactacccccattagtacc 670
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1922 agagtgtttatatctgtggcccttacgaaacatggcgcttcgactacccccattagtacc 1863
Query: 671 accactactgggtcccgagttattggaagagccagatagcggaggcggttgttatgcgga 730
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1862 accactactgggtcccgagttattggaagagccagatagcggaggcggttgtaatgcgga 1803
Query: 731 ggagctgaaattgaaaggagcctcgaacaacagtgaattcctcttacttttcctttctgg 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 ggagctgaaattgaaaggagcctcgaacaacagtgaattcctcttacttttcctttctgg 1743
Query: 791 tgatggggatctgttatgccttactggtgatctatttcttgacattggaggtaactttgg 850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1742 tgatggggatctgttatgccttactggtgatctatttcttgacattggaggtaactttgg 1683
Query: 851 ggcagg-acgtatttkaaggaaggttttttactatgtgtatggtaatctgatgttggacc 909
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1682 ggcaggaacgtatttgaaggaaggttttttactatgtgtatggtaatctgatgttggacc 1623
Query: 910 attaatcagttgagtatcatttgtagagtt 939
||||||||||||||||||||||||||||||
Sbjct: 1622 attaatcagttgagtatcatttgtagagtt 1593
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6908
Number of Sequences: 1807
Number of extensions: 6908
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 939
length of database: 10,358,551
effective HSP length: 16
effective length of query: 923
effective length of database: 10,329,639
effective search space: 9534256797
effective search space used: 9534256797
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)